Papers & preprints

Accelerating shark video surveys with AI and automated workflows

Jenrette, J. F., Agustines, A., Spencer, E. T., Schallert, R., Varini, F., Arnoldi, N., Madigan, D., White, T. , et al.

Ecological Informatics

Automatically counting and measuring Atlantic sea scallops (Placopecten magellanicus) from underwater imagery with object detection and bias-correction

Jenrette, J. F., Hart, D. R., Chang, J.-H., Fairclough, C., McManus, M. C.

Ecological Informatics

Addressing distributional and taxonomic uncertainty in the deep-sea giant isopod genus Bathynomus with an integrated observational and molecular framework

Jenrette, J. F., Riehl, T., Izioka, A. K., Motoki, S., Aldridge, S. E., Tokunaga, S., Watanabe, Y. Y., Gallagher, A.

Deep Sea Research Part I: Oceanographic Research Papers

Shark object-detection and tracking: a data sourcing and training study

Varini, F., Jenrette, J. F., Wilday, S., Gayford, J., Ferretti, F., Glocker, B.

Ecological Informatics

From data deficient to big data in shark conservation

Ferretti, F., Jenrette, J. F., Moro, S., Butner, C., Fox, E., Haddock, S. H. D., Jorgensen, S., Hastie, T. , et al.

Fish and Fisheries

Trophic niche partitioning between the white shark (Carcharodon carcharias) and the shortfin mako (Isurus oxyrinchus) in the Mediterranean Sea

Gambardella, C., Fernández-Corredor, E., Echwikhi, K., Jenrette, J. F., Lemsi, C., Moro, S., Schallert, R., Shea, B. , et al.

Wildlife Research

First satellite track of a juvenile shortfin mako shark (Isurus oxyrinchus) in the Mediterranean Sea

Shea, B., Chapple, T. K., Echwikhi, K., Gambardella, C., Jenrette, J. F., Moro, S., Schallert, R. J., Block, B. A. , et al.

Frontiers in Marine Science

On the tracks of white sharks in the Mediterranean Sea

Ferretti, F., Shea, B., Chapple, T., Gallagher, A., Gambardella, C., Jenrette, J. F., Moro, S., Echwikhi, K. , et al.

Frontiers in Marine Science

SharkTrack: an accurate, generalizable software for streamlining shark and ray underwater video analysis

Varini, F., Gayford, J. H., Jenrette, J. F., Witt, M., Garzon, F., Ferretti, F., Wilday, S., Bond, M. , et al.

arXiv preprint arXiv:2407.20623

Detecting white sharks in the Mediterranean with environmental DNA

Jenrette, J. F., Jenrette, J. L., Truelove, N. K., Moro, S., Dunn, N. I., Chapple, T., Gallagher, A., Gambardella, C. , et al.

Oceanography

Shark detection and classification with machine learning

Jenrette, J. F., Liu, Z. Y. C., Chimote, P., Hastie, T., Fox, E., Ferretti, F.

Ecological Informatics

Improved reference genome of the arboviral vector Aedes albopictus

Palatini, U., Masri, R. A., Cosme, L. V., Koren, S., Thibaud-Nissen, F., Biedler, J. K., … Jenrette, J. F. , et al.

Genome Biology

Species diversity, taxonomy, and distribution of Chondrichthyes in the Mediterranean and Black Sea

Serena, F., Abella, A. J., Bargnesi, F., Barone, M., Colloca, F., Ferretti, F., Fiorentino, F., Jenrette, J. F. , et al.

The European Zoological Journal