@article{jenrette2026sharkvideo,
  author   = {Jenrette, Jeremy F. and Agustines, A. and Spencer, E. T. and Schallert, R. and Varini, F. and Arnoldi, N. and Madigan, D. and White, T. and Koller, K. and Berglund, J. and Kinzer, D. and Block, B. and Khalid, S. and Ferretti, F.},
  title    = {Accelerating shark video surveys with {AI} and automated workflows},
  journal  = {Ecological Informatics},
  year     = {2026}
}

@article{jenrette2026scallops,
  author   = {Jenrette, Jeremy F. and Hart, Deborah R. and Chang, Jui-Han and Fairclough, Christopher and McManus, M. Conor},
  title    = {Automatically counting and measuring Atlantic sea scallops (\textit{Placopecten magellanicus}) from underwater imagery with object detection and bias-correction},
  journal  = {Ecological Informatics},
  year     = {2026}
}

@article{jenrette2026bathynomus,
  author   = {Jenrette, Jeremy F. and Riehl, T. and Izioka, A. K. and Motoki, S. and Aldridge, S. E. and Tokunaga, S. and Watanabe, Y. Y. and Gallagher, A.},
  title    = {Addressing distributional and taxonomic uncertainty in the deep-sea giant isopod genus \textit{Bathynomus} with an integrated observational and molecular framework},
  journal  = {Deep Sea Research Part I: Oceanographic Research Papers},
  year     = {2026}
}

@article{varini2026sharkod,
  author   = {Varini, F. and Jenrette, Jeremy F. and Wilday, S. and Gayford, J. and Ferretti, F. and Glocker, B.},
  title    = {Shark object-detection and tracking: a data sourcing and training study},
  journal  = {Ecological Informatics},
  year     = {2026}
}

@article{ferretti2025bigdata,
  author   = {Ferretti, F. and Jenrette, Jeremy F. and Moro, S. and Butner, C. and Fox, E. and Haddock, S. H. D. and Jorgensen, S. and Hastie, T. and Micheli, F.},
  title    = {From data deficient to big data in shark conservation},
  journal  = {Fish and Fisheries},
  year     = {2025},
  doi      = {10.1111/faf.70006}
}

@article{gambardella2025trophic,
  author   = {Gambardella, C. and Fern{\'a}ndez-Corredor, E. and Echwikhi, K. and Jenrette, Jeremy F. and Lemsi, C. and Moro, S. and Schallert, R. and Shea, B. and Zammit, M. and Cerrano, C. and Colloca, F. and Romeo, T. and Navarro, J. and Ferretti, F.},
  title    = {Trophic niche partitioning between the white shark (\textit{Carcharodon carcharias}) and the shortfin mako (\textit{Isurus oxyrinchus}) in the Mediterranean Sea},
  journal  = {Wildlife Research},
  year     = {2025},
  doi      = {10.1071/WR25028}
}

@article{shea2024mako,
  author   = {Shea, B. and Chapple, T. K. and Echwikhi, K. and Gambardella, C. and Jenrette, Jeremy F. and Moro, S. and Schallert, R. J. and Block, B. A. and Ferretti, F.},
  title    = {First satellite track of a juvenile shortfin mako shark (\textit{Isurus oxyrinchus}) in the Mediterranean Sea},
  journal  = {Frontiers in Marine Science},
  year     = {2024},
  doi      = {10.3389/fmars.2024.1423507}
}

@article{ferretti2024tracks,
  author   = {Ferretti, F. and Shea, B. and Chapple, T. and Gallagher, A. and Gambardella, C. and Jenrette, Jeremy F. and Moro, S. and Echwikhi, K. and Schallert, R. and Block, B.},
  title    = {On the tracks of white sharks in the Mediterranean Sea},
  journal  = {Frontiers in Marine Science},
  year     = {2024},
  doi      = {10.3389/fmars.2024.1425511}
}

@misc{varini2024sharktrack,
  author        = {Varini, F. and Gayford, J. H. and Jenrette, Jeremy F. and Witt, M. and Garzon, F. and Ferretti, F. and Wilday, S. and Bond, M. and Heithaus, M. R. and Robinson, D. and Carter, D. and Gumbs, N. and Webster, V. and Glocker, B.},
  title         = {{SharkTrack}: an accurate, generalizable software for streamlining shark and ray underwater video analysis},
  year          = {2024},
  eprint        = {2407.20623},
  archiveprefix = {arXiv},
  journal       = {arXiv preprint arXiv:2407.20623},
  url           = {https://arxiv.org/abs/2407.20623}
}

@article{jenrette2023edna,
  author   = {Jenrette, Jeremy F. and Jenrette, J. L. and Truelove, N. K. and Moro, S. and Dunn, N. I. and Chapple, T. and Gallagher, A. and Gambardella, C. and Schallert, R. and Shea, B. D. and Curnick, D. J. and Block, B. and Ferretti, F.},
  title    = {Detecting white sharks in the Mediterranean with environmental {DNA}},
  journal  = {Oceanography},
  year     = {2023},
  url      = {https://tos.org/oceanography/article/detecting-mediterranean-white-sharks-with-environmental-dna}
}

@article{jenrette2022shark,
  author   = {Jenrette, Jeremy F. and Liu, Z. Y.-C. and Chimote, P. and Hastie, T. and Fox, E. and Ferretti, F.},
  title    = {Shark detection and classification with machine learning},
  journal  = {Ecological Informatics},
  year     = {2022},
  url      = {https://www.sciencedirect.com/science/article/abs/pii/S1574954122001236}
}

@article{palatini2020aedes,
  author   = {Palatini, U. and Masri, R. A. and Cosme, L. V. and Koren, S. and Thibaud-Nissen, F. and Biedler, J. K. and Krsticevic, F. and Johnston, J. S. and Halbach, R. and Crawford, J. E. and Antoshechkin, I. and Failloux, A.-B. and Pischedda, E. and Marconcini, M. and Ghurye, J. and Rhie, A. and Sharma, A. and Karagodin, D. A. and Jenrette, Jeremy F. and Gamez, S. and Miesen, P. and Masterson, P. and Caccone, A. and Sharakhova, M. V. and Tu, Z. and Papathanos, P. A. and Van Rij, R. P. and Akbari, O. S. and Powell, J. and Phillippy, A. M. and Bonizzoni, M.},
  title    = {Improved reference genome of the arboviral vector \textit{Aedes albopictus}},
  journal  = {Genome Biology},
  year     = {2020},
  doi      = {10.1186/s13059-020-02141-w}
}

@article{serena2020chondrichthyes,
  author   = {Serena, F. and Abella, A. J. and Bargnesi, F. and Barone, M. and Colloca, F. and Ferretti, F. and Fiorentino, F. and Jenrette, Jeremy F. and Moro, S.},
  title    = {Species diversity, taxonomy, and distribution of Chondrichthyes in the Mediterranean and Black Sea},
  journal  = {The European Zoological Journal},
  year     = {2020},
  doi      = {10.1080/24750263.2020.1805518}
}