Shark Detector, sharkPulse tooling, eDNA and spatial-modeling code from my PhD and independent research.
- Shark-Detector Shark classification model
- jj-website This is Jeremy's professional website repository
- kayak-pi A fish finder for any kayak
- metabar Bioinformatic pipeline to assign taxonomy to metabarcoded eDNA sampels (MarVer3, MiFish-E)
- bathy2026 This is the official code and data repository for the manuscript titled, "Addressing distributional and taxonomic uncertainty in the deep-sea giant isopod genus Bathynomus with an integrated observational and molecular framework"
- bathy_methods Here contains the code and observational database describing global Bathynomus distribution sourcing and structuring, eDNA particle tracking, and other miscellaneous analyses
- shark-abundance sourcing iNaturalist data and using statistical analyses to predict relative abundance of sharks
- particle-abundance Predicting environmental DNA particle distribution, degradation, and relative abundance
